pbmarkdup

note

Takes one or multiple sequencing chips of an amplified libray as HiFi reads and marks or removes duplicates.

https://github.com/PacificBiosciences/pbmarkdup

The module adds the % Unique Molecules and %Duplicate Reads (hidden) to the General Statistics table.

File search patterns

pbmarkdup:
  contents_re: LIBRARY +READS +UNIQUE MOLECULES +DUPLICATE READS
  num_lines: 5